Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 AL355312.1-201ENST00000407115 2176 ntBASIC14.01□□□□□ -0.17
COL8A1P27658 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL8A1P27658 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
COL8A1P27658 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
COL8A1P27658 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.01□□□□□ -0.17
COL8A1P27658 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.01□□□□□ -0.17
COL8A1P27658 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 AC016694.1-201ENST00000434179 700 ntBASIC14.01□□□□□ -0.17
COL8A1P27658 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.01□□□□□ -0.17
COL8A1P27658 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.01□□□□□ -0.17
COL8A1P27658 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 AKR7A2P1-201ENST00000460134 915 ntBASIC14.01□□□□□ -0.17
COL8A1P27658 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.01□□□□□ -0.17
COL8A1P27658 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.01□□□□□ -0.17
COL8A1P27658 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.01□□□□□ -0.17
COL8A1P27658 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.01□□□□□ -0.17
COL8A1P27658 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.01□□□□□ -0.17
COL8A1P27658 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.01□□□□□ -0.17
COL8A1P27658 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.01□□□□□ -0.17
COL8A1P27658 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.01□□□□□ -0.17
COL8A1P27658 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 AC244452.3-201ENST00000636814 210 ntBASIC14.01□□□□□ -0.17
COL8A1P27658 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL8A1P27658 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.01□□□□□ -0.17
COL8A1P27658 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL8A1P27658 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.01□□□□□ -0.17
COL8A1P27658 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
COL8A1P27658 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
COL8A1P27658 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 MSTO2P-201ENST00000314835 1709 ntBASIC14.01□□□□□ -0.17
COL8A1P27658 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.01□□□□□ -0.17
COL8A1P27658 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.01□□□□□ -0.17
COL8A1P27658 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A1P27658 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14□□□□□ -0.17
COL8A1P27658 FRMD8P1-201ENST00000440433 1524 ntBASIC14□□□□□ -0.17
COL8A1P27658 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14□□□□□ -0.17
COL8A1P27658 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14□□□□□ -0.17
COL8A1P27658 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 AL442647.2-201ENST00000429864 857 ntBASIC14□□□□□ -0.17
COL8A1P27658 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14□□□□□ -0.17
COL8A1P27658 RPS2P36-201ENST00000456516 831 ntBASIC14□□□□□ -0.17
COL8A1P27658 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14□□□□□ -0.17
COL8A1P27658 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 ADM-202ENST00000524948 584 ntTSL 2 BASIC14□□□□□ -0.17
COL8A1P27658 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14□□□□□ -0.17
COL8A1P27658 AC036164.1-201ENST00000570544 333 ntBASIC14□□□□□ -0.17
COL8A1P27658 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14□□□□□ -0.17
COL8A1P27658 SPCS2P2-201ENST00000603270 608 ntBASIC14□□□□□ -0.17
COL8A1P27658 LINC01115-203ENST00000606068 577 ntBASIC14□□□□□ -0.17
COL8A1P27658 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14□□□□□ -0.17
COL8A1P27658 MIR7845-201ENST00000618396 99 ntBASIC14□□□□□ -0.17
COL8A1P27658 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14□□□□□ -0.17
COL8A1P27658 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14□□□□□ -0.17
COL8A1P27658 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14□□□□□ -0.17
COL8A1P27658 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
COL8A1P27658 AC108860.2-201ENST00000562760 2183 ntBASIC14□□□□□ -0.17
COL8A1P27658 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
COL8A1P27658 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
COL8A1P27658 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14□□□□□ -0.17
COL8A1P27658 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A1P27658 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14□□□□□ -0.17
COL8A1P27658 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A1P27658 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
COL8A1P27658 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A1P27658 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COL8A1P27658 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms