Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN3P26045 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN3P26045 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN3P26045 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN3P26045 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PTPN3P26045 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.4■□□□□ 0.22
PTPN3P26045 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN3P26045 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN3P26045 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PTPN3P26045 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN3P26045 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN3P26045 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 GPS2P2-201ENST00000430745 888 ntBASIC16.4■□□□□ 0.22
PTPN3P26045 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN3P26045 ALG1L8P-201ENST00000533887 760 ntBASIC16.4■□□□□ 0.22
PTPN3P26045 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN3P26045 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN3P26045 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.4■□□□□ 0.22
PTPN3P26045 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN3P26045 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN3P26045 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PTPN3P26045 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN3P26045 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.39■□□□□ 0.22
PTPN3P26045 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.39■□□□□ 0.22
PTPN3P26045 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
PTPN3P26045 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PTPN3P26045 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN3P26045 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.39■□□□□ 0.21
PTPN3P26045 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN3P26045 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN3P26045 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN3P26045 AC004835.2-201ENST00000603762 682 ntBASIC16.39■□□□□ 0.21
PTPN3P26045 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.39■□□□□ 0.21
PTPN3P26045 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN3P26045 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PTPN3P26045 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTPN3P26045 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTPN3P26045 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTPN3P26045 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTPN3P26045 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN3P26045 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PTPN3P26045 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN3P26045 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN3P26045 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN3P26045 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 CYP4F24P-201ENST00000586049 1580 ntBASIC16.38■□□□□ 0.21
PTPN3P26045 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN3P26045 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.38■□□□□ 0.21
PTPN3P26045 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN3P26045 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms