Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VCLP18206 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.25■□□□□ 0.19
VCLP18206 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.25■□□□□ 0.19
VCLP18206 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.25■□□□□ 0.19
VCLP18206 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VCLP18206 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.25■□□□□ 0.19
VCLP18206 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.25■□□□□ 0.19
VCLP18206 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.25■□□□□ 0.19
VCLP18206 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
VCLP18206 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.25■□□□□ 0.19
VCLP18206 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.25■□□□□ 0.19
VCLP18206 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.25■□□□□ 0.19
VCLP18206 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.25■□□□□ 0.19
VCLP18206 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.25■□□□□ 0.19
VCLP18206 LINC01144-201ENST00000626198 1710 ntBASIC16.25■□□□□ 0.19
VCLP18206 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VCLP18206 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 UXT-AS1-201ENST00000590504 1525 ntBASIC16.24■□□□□ 0.19
VCLP18206 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.24■□□□□ 0.19
VCLP18206 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.24■□□□□ 0.19
VCLP18206 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.24■□□□□ 0.19
VCLP18206 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.24■□□□□ 0.19
VCLP18206 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 AC023141.5-201ENST00000458585 616 ntBASIC16.24■□□□□ 0.19
VCLP18206 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
VCLP18206 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.24■□□□□ 0.19
VCLP18206 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.24■□□□□ 0.19
VCLP18206 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.24■□□□□ 0.19
VCLP18206 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.24■□□□□ 0.19
VCLP18206 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
VCLP18206 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
VCLP18206 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.24■□□□□ 0.19
VCLP18206 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCLP18206 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.23■□□□□ 0.19
VCLP18206 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VCLP18206 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
VCLP18206 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.23■□□□□ 0.19
VCLP18206 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.23■□□□□ 0.19
VCLP18206 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
VCLP18206 MTHFR-217ENST00000641820 1569 ntBASIC16.23■□□□□ 0.19
VCLP18206 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
VCLP18206 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCLP18206 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.23■□□□□ 0.19
VCLP18206 AL627223.1-201ENST00000416693 442 ntBASIC16.23■□□□□ 0.19
VCLP18206 KRT18P32-201ENST00000424695 1287 ntBASIC16.23■□□□□ 0.19
VCLP18206 SPCS2P4-201ENST00000436160 681 ntBASIC16.23■□□□□ 0.19
VCLP18206 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.23■□□□□ 0.19
VCLP18206 AC092183.1-201ENST00000469884 875 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms