Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THRAP10827 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
THRAP10827 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
THRAP10827 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.21■□□□□ 0.19
THRAP10827 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
THRAP10827 AKAP8P1-201ENST00000434743 1349 ntBASIC16.21■□□□□ 0.19
THRAP10827 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
THRAP10827 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
THRAP10827 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
THRAP10827 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
THRAP10827 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.21■□□□□ 0.19
THRAP10827 AC079140.1-201ENST00000508039 487 ntBASIC16.21■□□□□ 0.19
THRAP10827 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
THRAP10827 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.21■□□□□ 0.19
THRAP10827 AL009183.1-201ENST00000603760 355 ntBASIC16.21■□□□□ 0.19
THRAP10827 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.21■□□□□ 0.19
THRAP10827 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.21■□□□□ 0.19
THRAP10827 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.21■□□□□ 0.19
THRAP10827 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
THRAP10827 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
THRAP10827 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.21■□□□□ 0.18
THRAP10827 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
THRAP10827 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
THRAP10827 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
THRAP10827 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
THRAP10827 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.21■□□□□ 0.18
THRAP10827 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
THRAP10827 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.2■□□□□ 0.18
THRAP10827 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.2■□□□□ 0.18
THRAP10827 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.2■□□□□ 0.18
THRAP10827 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 AP005117.1-202ENST00000581724 1908 ntBASIC16.2■□□□□ 0.18
THRAP10827 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
THRAP10827 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
THRAP10827 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.2■□□□□ 0.18
THRAP10827 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
THRAP10827 HCG4-201ENST00000418983 998 ntBASIC16.2■□□□□ 0.18
THRAP10827 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.2■□□□□ 0.18
THRAP10827 AC005237.2-201ENST00000434368 219 ntBASIC16.2■□□□□ 0.18
THRAP10827 AL592309.1-201ENST00000443127 649 ntBASIC16.2■□□□□ 0.18
THRAP10827 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.2■□□□□ 0.18
THRAP10827 AC109635.5-201ENST00000533593 962 ntBASIC16.2■□□□□ 0.18
THRAP10827 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.2■□□□□ 0.18
THRAP10827 AC243562.1-201ENST00000560672 389 ntBASIC16.2■□□□□ 0.18
THRAP10827 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.2■□□□□ 0.18
THRAP10827 MIR3197-201ENST00000582241 73 ntBASIC16.2■□□□□ 0.18
THRAP10827 AC011467.4-201ENST00000594891 528 ntBASIC16.2■□□□□ 0.18
THRAP10827 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.2■□□□□ 0.18
THRAP10827 AC093512.1-201ENST00000617969 520 ntBASIC16.2■□□□□ 0.18
THRAP10827 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.2■□□□□ 0.18
THRAP10827 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
THRAP10827 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.2■□□□□ 0.18
THRAP10827 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.2■□□□□ 0.18
THRAP10827 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.2■□□□□ 0.18
THRAP10827 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.2■□□□□ 0.18
THRAP10827 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THRAP10827 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
THRAP10827 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THRAP10827 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THRAP10827 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
THRAP10827 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.19■□□□□ 0.18
THRAP10827 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.19■□□□□ 0.18
THRAP10827 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms