Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 RCN1P2-201ENST00000398357 915 ntBASIC12.07□□□□□ -0.48
SMIM17P0DL12 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 NCF1C-201ENST00000438382 1427 ntBASIC12.07□□□□□ -0.48
SMIM17P0DL12 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 AC104076.2-201ENST00000448912 469 ntBASIC12.07□□□□□ -0.48
SMIM17P0DL12 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 AC091607.1-201ENST00000490318 1060 ntBASIC12.07□□□□□ -0.48
SMIM17P0DL12 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 AL671710.1-201ENST00000610245 2349 ntBASIC12.07□□□□□ -0.48
SMIM17P0DL12 AC114341.1-201ENST00000618070 349 ntBASIC12.07□□□□□ -0.48
SMIM17P0DL12 AP000867.4-201ENST00000641616 219 ntBASIC12.07□□□□□ -0.48
SMIM17P0DL12 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM17P0DL12 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.07□□□□□ -0.48
SMIM17P0DL12 AC073957.3-201ENST00000609998 6758 ntBASIC12.07□□□□□ -0.48
SMIM17P0DL12 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 AL023775.1-201ENST00000454907 1746 ntBASIC12.06□□□□□ -0.48
SMIM17P0DL12 LINC01144-201ENST00000626198 1710 ntBASIC12.06□□□□□ -0.48
SMIM17P0DL12 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 AC013268.4-201ENST00000637413 2228 ntBASIC12.06□□□□□ -0.48
SMIM17P0DL12 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 AC131212.3-201ENST00000624087 4219 ntBASIC12.06□□□□□ -0.48
SMIM17P0DL12 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 KRT8P39-201ENST00000396270 1433 ntBASIC12.06□□□□□ -0.48
SMIM17P0DL12 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 TOB2P1-201ENST00000469761 992 ntBASIC12.06□□□□□ -0.48
SMIM17P0DL12 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 AP005901.3-202ENST00000581653 237 ntBASIC12.06□□□□□ -0.48
SMIM17P0DL12 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 AC004817.3-201ENST00000602957 2129 ntBASIC12.06□□□□□ -0.48
SMIM17P0DL12 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 PCGF3-213ENST00000620529 1899 ntBASIC12.06□□□□□ -0.48
SMIM17P0DL12 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms