Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.67■□□□□ 0.26
CD48P09326 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.67■□□□□ 0.26
CD48P09326 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD48P09326 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
CD48P09326 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CD48P09326 HLA-H-201ENST00000383620 1096 ntBASIC16.67■□□□□ 0.26
CD48P09326 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
CD48P09326 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.67■□□□□ 0.26
CD48P09326 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.67■□□□□ 0.26
CD48P09326 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.67■□□□□ 0.26
CD48P09326 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.67■□□□□ 0.26
CD48P09326 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD48P09326 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CD48P09326 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.67■□□□□ 0.26
CD48P09326 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.67■□□□□ 0.26
CD48P09326 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD48P09326 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD48P09326 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD48P09326 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.67■□□□□ 0.26
CD48P09326 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CD48P09326 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD48P09326 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.66■□□□□ 0.26
CD48P09326 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CD48P09326 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.66■□□□□ 0.26
CD48P09326 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.66■□□□□ 0.26
CD48P09326 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.66■□□□□ 0.26
CD48P09326 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.66■□□□□ 0.26
CD48P09326 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.66■□□□□ 0.26
CD48P09326 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.66■□□□□ 0.26
CD48P09326 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.66■□□□□ 0.26
CD48P09326 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.66■□□□□ 0.26
CD48P09326 AC013268.4-201ENST00000637413 2228 ntBASIC16.66■□□□□ 0.26
CD48P09326 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CD48P09326 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD48P09326 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CD48P09326 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
CD48P09326 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.65■□□□□ 0.26
CD48P09326 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.65■□□□□ 0.26
CD48P09326 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.65■□□□□ 0.26
CD48P09326 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CD48P09326 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD48P09326 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CD48P09326 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CD48P09326 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.65■□□□□ 0.26
CD48P09326 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.65■□□□□ 0.26
CD48P09326 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CD48P09326 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.65■□□□□ 0.26
CD48P09326 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 AL627223.1-201ENST00000416693 442 ntBASIC16.65■□□□□ 0.26
CD48P09326 UPF3AP3-201ENST00000420996 769 ntBASIC16.65■□□□□ 0.26
CD48P09326 RPS8P6-201ENST00000426177 609 ntBASIC16.65■□□□□ 0.26
CD48P09326 AC005237.2-201ENST00000434368 219 ntBASIC16.65■□□□□ 0.26
CD48P09326 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.65■□□□□ 0.26
CD48P09326 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.65■□□□□ 0.26
CD48P09326 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.65■□□□□ 0.26
CD48P09326 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.65■□□□□ 0.26
CD48P09326 RARRES2P9-201ENST00000565168 469 ntBASIC16.65■□□□□ 0.26
CD48P09326 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
CD48P09326 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.65■□□□□ 0.26
CD48P09326 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CD48P09326 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CD48P09326 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD48P09326 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.65■□□□□ 0.26
CD48P09326 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CD48P09326 AC092127.1-201ENST00000567093 3455 ntBASIC16.65■□□□□ 0.26
CD48P09326 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD48P09326 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.65■□□□□ 0.26
CD48P09326 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
CD48P09326 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms