Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPNS1P04632 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPNS1P04632 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPNS1P04632 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPNS1P04632 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPNS1P04632 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.03■□□□□ 0.16
CAPNS1P04632 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.03■□□□□ 0.16
CAPNS1P04632 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPNS1P04632 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
CAPNS1P04632 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 AL512384.1-201ENST00000406683 331 ntBASIC16.03■□□□□ 0.16
CAPNS1P04632 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPNS1P04632 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPNS1P04632 KRT17P8-201ENST00000540749 863 ntBASIC16.03■□□□□ 0.16
CAPNS1P04632 MIR4259-201ENST00000584466 101 ntBASIC16.03■□□□□ 0.16
CAPNS1P04632 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPNS1P04632 AL138828.2-201ENST00000615812 383 ntBASIC16.03■□□□□ 0.16
CAPNS1P04632 SPTSSB-204ENST00000617024 1292 ntBASIC16.03■□□□□ 0.16
CAPNS1P04632 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPNS1P04632 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CAPNS1P04632 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CAPNS1P04632 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPNS1P04632 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPNS1P04632 AC007541.1-201ENST00000570282 1469 ntBASIC16.03■□□□□ 0.16
CAPNS1P04632 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPNS1P04632 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPNS1P04632 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPNS1P04632 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPNS1P04632 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPNS1P04632 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPNS1P04632 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPNS1P04632 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPNS1P04632 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CAPNS1P04632 AC079328.2-201ENST00000561241 3354 ntBASIC16.02■□□□□ 0.16
CAPNS1P04632 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CAPNS1P04632 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPNS1P04632 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CAPNS1P04632 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.02■□□□□ 0.16
CAPNS1P04632 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.02■□□□□ 0.16
CAPNS1P04632 HCG4-201ENST00000418983 998 ntBASIC16.02■□□□□ 0.16
CAPNS1P04632 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPNS1P04632 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CAPNS1P04632 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CAPNS1P04632 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPNS1P04632 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPNS1P04632 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPNS1P04632 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.02■□□□□ 0.16
CAPNS1P04632 MIR4525-201ENST00000580000 75 ntBASIC16.02■□□□□ 0.16
CAPNS1P04632 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPNS1P04632 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPNS1P04632 SPDYE12P-201ENST00000618416 771 ntBASIC16.02■□□□□ 0.16
CAPNS1P04632 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPNS1P04632 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CAPNS1P04632 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPNS1P04632 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
CAPNS1P04632 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CAPNS1P04632 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CAPNS1P04632 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.02■□□□□ 0.15
CAPNS1P04632 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.02■□□□□ 0.15
CAPNS1P04632 OR6D1P-203ENST00000641209 4860 ntBASIC16.02■□□□□ 0.15
CAPNS1P04632 AL596087.1-201ENST00000400979 1969 ntBASIC16.02■□□□□ 0.15
CAPNS1P04632 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CAPNS1P04632 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPNS1P04632 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPNS1P04632 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.02■□□□□ 0.15
CAPNS1P04632 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.02■□□□□ 0.15
CAPNS1P04632 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPNS1P04632 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms