Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VTNP04004 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.54■□□□□ 0.4
VTNP04004 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTNP04004 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.54■□□□□ 0.4
VTNP04004 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.53■□□□□ 0.4
VTNP04004 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.53■□□□□ 0.4
VTNP04004 CLK3P2-201ENST00000427566 1453 ntBASIC17.53■□□□□ 0.4
VTNP04004 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 OR8S1-201ENST00000310194 1080 ntBASIC17.53■□□□□ 0.4
VTNP04004 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
VTNP04004 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.53■□□□□ 0.4
VTNP04004 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.53■□□□□ 0.4
VTNP04004 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
VTNP04004 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.53■□□□□ 0.4
VTNP04004 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
VTNP04004 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VTNP04004 CDC14C-201ENST00000428251 1719 ntBASIC17.52■□□□□ 0.4
VTNP04004 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.52■□□□□ 0.4
VTNP04004 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.52■□□□□ 0.4
VTNP04004 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
VTNP04004 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTNP04004 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTNP04004 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.52■□□□□ 0.4
VTNP04004 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
VTNP04004 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTNP04004 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTNP04004 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTNP04004 AC018892.3-201ENST00000623986 2499 ntBASIC17.52■□□□□ 0.4
VTNP04004 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VTNP04004 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.52■□□□□ 0.4
VTNP04004 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VTNP04004 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTNP04004 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTNP04004 KRT18P64-201ENST00000434946 1219 ntBASIC17.52■□□□□ 0.4
VTNP04004 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.52■□□□□ 0.4
VTNP04004 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VTNP04004 PHKG1P2-201ENST00000457537 863 ntBASIC17.52■□□□□ 0.4
VTNP04004 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.52■□□□□ 0.4
VTNP04004 AC011495.1-201ENST00000498085 584 ntBASIC17.52■□□□□ 0.4
VTNP04004 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.52■□□□□ 0.4
VTNP04004 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.52■□□□□ 0.4
VTNP04004 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.52■□□□□ 0.4
VTNP04004 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.52■□□□□ 0.4
VTNP04004 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.52■□□□□ 0.4
VTNP04004 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
VTNP04004 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.52■□□□□ 0.4
VTNP04004 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VTNP04004 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
VTNP04004 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTNP04004 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VTNP04004 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VTNP04004 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
VTNP04004 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.52■□□□□ 0.39
VTNP04004 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.52■□□□□ 0.39
VTNP04004 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VTNP04004 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VTNP04004 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.52■□□□□ 0.39
VTNP04004 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VTNP04004 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
VTNP04004 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VTNP04004 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.51■□□□□ 0.39
VTNP04004 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VTNP04004 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.51■□□□□ 0.39
VTNP04004 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.51■□□□□ 0.39
VTNP04004 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.51■□□□□ 0.39
VTNP04004 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VTNP04004 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.51■□□□□ 0.39
VTNP04004 RN7SL837P-201ENST00000463010 287 ntBASIC17.51■□□□□ 0.39
VTNP04004 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.51■□□□□ 0.39
VTNP04004 RRP7BP-205ENST00000566851 833 ntBASIC17.51■□□□□ 0.39
VTNP04004 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
VTNP04004 WFDC1-204ENST00000613603 549 ntBASIC17.51■□□□□ 0.39
VTNP04004 AL158212.4-201ENST00000624062 1286 ntBASIC17.51■□□□□ 0.39
VTNP04004 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.51■□□□□ 0.39
VTNP04004 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.51■□□□□ 0.39
VTNP04004 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms