Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MBD4O95243 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.11■□□□□ 0.65
MBD4O95243 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD4O95243 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
MBD4O95243 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD4O95243 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
MBD4O95243 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.11■□□□□ 0.65
MBD4O95243 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MBD4O95243 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.11■□□□□ 0.65
MBD4O95243 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.11■□□□□ 0.65
MBD4O95243 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD4O95243 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.11■□□□□ 0.65
MBD4O95243 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.11■□□□□ 0.65
MBD4O95243 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.11■□□□□ 0.65
MBD4O95243 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD4O95243 AC074044.1-201ENST00000609673 707 ntBASIC19.11■□□□□ 0.65
MBD4O95243 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MBD4O95243 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD4O95243 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 CDC14C-201ENST00000428251 1719 ntBASIC19.11■□□□□ 0.65
MBD4O95243 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD4O95243 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.11■□□□□ 0.65
MBD4O95243 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MBD4O95243 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD4O95243 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 LINC02447-202ENST00000501888 2146 ntBASIC19.1■□□□□ 0.65
MBD4O95243 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MBD4O95243 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
MBD4O95243 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.1■□□□□ 0.65
MBD4O95243 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MBD4O95243 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
MBD4O95243 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.1■□□□□ 0.65
MBD4O95243 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 AC074338.1-201ENST00000416825 156 ntBASIC19.1■□□□□ 0.65
MBD4O95243 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.1■□□□□ 0.65
MBD4O95243 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.1■□□□□ 0.65
MBD4O95243 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 LINC01115-203ENST00000606068 577 ntBASIC19.1■□□□□ 0.65
MBD4O95243 AC004233.3-201ENST00000607794 1269 ntBASIC19.1■□□□□ 0.65
MBD4O95243 AC024909.3-201ENST00000611513 2257 ntBASIC19.1■□□□□ 0.65
MBD4O95243 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MBD4O95243 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MBD4O95243 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
MBD4O95243 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD4O95243 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
MBD4O95243 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
MBD4O95243 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MBD4O95243 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.09■□□□□ 0.65
MBD4O95243 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
MBD4O95243 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MBD4O95243 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
MBD4O95243 TARDBPP1-201ENST00000442013 1203 ntBASIC19.09■□□□□ 0.65
MBD4O95243 PHKG1P2-201ENST00000457537 863 ntBASIC19.09■□□□□ 0.65
MBD4O95243 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.09■□□□□ 0.65
MBD4O95243 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 HNRNPUP1-201ENST00000554987 333 ntBASIC19.09■□□□□ 0.65
MBD4O95243 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.09■□□□□ 0.65
MBD4O95243 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.09■□□□□ 0.65
MBD4O95243 SRD5A3P1-201ENST00000603021 949 ntBASIC19.09■□□□□ 0.65
MBD4O95243 AL450472.2-201ENST00000603663 1156 ntBASIC19.09■□□□□ 0.65
MBD4O95243 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.09■□□□□ 0.65
MBD4O95243 Z97205.2-201ENST00000564697 1639 ntBASIC19.09■□□□□ 0.65
MBD4O95243 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.09■□□□□ 0.65
MBD4O95243 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MBD4O95243 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms