Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.87■□□□□ 0.93
LTN1O94822 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.87■□□□□ 0.93
LTN1O94822 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.87■□□□□ 0.93
LTN1O94822 POLL-217ENST00000628479 1953 ntTSL 5 BASIC20.87■□□□□ 0.93
LTN1O94822 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC20.87■□□□□ 0.93
LTN1O94822 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LTN1O94822 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.87■□□□□ 0.93
LTN1O94822 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LTN1O94822 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.87■□□□□ 0.93
LTN1O94822 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
LTN1O94822 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LTN1O94822 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LTN1O94822 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LTN1O94822 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LTN1O94822 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LTN1O94822 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.87■□□□□ 0.93
LTN1O94822 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.86■□□□□ 0.93
LTN1O94822 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LTN1O94822 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LTN1O94822 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LTN1O94822 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.86■□□□□ 0.93
LTN1O94822 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LTN1O94822 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC20.86■□□□□ 0.93
LTN1O94822 IGHJ2P-201ENST00000454480 60 ntBASIC20.86■□□□□ 0.93
LTN1O94822 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC20.86■□□□□ 0.93
LTN1O94822 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.86■□□□□ 0.93
LTN1O94822 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LTN1O94822 MIR4313-201ENST00000580760 101 ntBASIC20.86■□□□□ 0.93
LTN1O94822 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LTN1O94822 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.86■□□□□ 0.93
LTN1O94822 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LTN1O94822 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC20.86■□□□□ 0.93
LTN1O94822 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LTN1O94822 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.86■□□□□ 0.93
LTN1O94822 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.86■□□□□ 0.93
LTN1O94822 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.86■□□□□ 0.93
LTN1O94822 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LTN1O94822 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LTN1O94822 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LTN1O94822 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.85■□□□□ 0.93
LTN1O94822 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.85■□□□□ 0.93
LTN1O94822 MIR3615-201ENST00000581999 87 ntBASIC20.85■□□□□ 0.93
LTN1O94822 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.85■□□□□ 0.93
LTN1O94822 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
LTN1O94822 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.85■□□□□ 0.93
LTN1O94822 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.85■□□□□ 0.93
LTN1O94822 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LTN1O94822 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LTN1O94822 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LTN1O94822 FAM197Y7-201ENST00000432892 766 ntBASIC20.85■□□□□ 0.93
LTN1O94822 AC104306.2-201ENST00000451877 341 ntBASIC20.85■□□□□ 0.93
LTN1O94822 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LTN1O94822 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.85■□□□□ 0.93
LTN1O94822 KC6-205ENST00000599934 556 ntTSL 4 BASIC20.85■□□□□ 0.93
LTN1O94822 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC20.85■□□□□ 0.93
LTN1O94822 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LTN1O94822 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LTN1O94822 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.84■□□□□ 0.93
LTN1O94822 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.84■□□□□ 0.93
LTN1O94822 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.84■□□□□ 0.93
LTN1O94822 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.84■□□□□ 0.93
LTN1O94822 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.84■□□□□ 0.93
LTN1O94822 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.84■□□□□ 0.93
LTN1O94822 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.84■□□□□ 0.93
LTN1O94822 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 AL008638.5-201ENST00000623814 1298 ntBASIC20.84■□□□□ 0.93
LTN1O94822 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
LTN1O94822 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.84■□□□□ 0.93
LTN1O94822 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTN1O94822 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
LTN1O94822 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.83■□□□□ 0.93
LTN1O94822 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 KRT8P35-201ENST00000483942 1338 ntBASIC20.83■□□□□ 0.93
LTN1O94822 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
LTN1O94822 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LTN1O94822 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.83■□□□□ 0.93
LTN1O94822 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 AC091804.1-201ENST00000486888 567 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms