Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST1O76090 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST1O76090 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST1O76090 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BEST1O76090 AL513523.2-202ENST00000427283 2040 ntBASIC16.81■□□□□ 0.28
BEST1O76090 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST1O76090 AC011477.6-201ENST00000604980 1927 ntBASIC16.81■□□□□ 0.28
BEST1O76090 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST1O76090 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST1O76090 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST1O76090 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST1O76090 FAM207CP-201ENST00000443486 507 ntBASIC16.81■□□□□ 0.28
BEST1O76090 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.81■□□□□ 0.28
BEST1O76090 GNAQP1-201ENST00000444815 1067 ntBASIC16.81■□□□□ 0.28
BEST1O76090 AL589987.1-201ENST00000453380 819 ntBASIC16.81■□□□□ 0.28
BEST1O76090 PHKG1P2-201ENST00000457537 863 ntBASIC16.81■□□□□ 0.28
BEST1O76090 SDHAP3-202ENST00000515467 728 ntBASIC16.81■□□□□ 0.28
BEST1O76090 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST1O76090 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST1O76090 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST1O76090 AC104794.3-201ENST00000566840 1248 ntBASIC16.81■□□□□ 0.28
BEST1O76090 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST1O76090 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST1O76090 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.81■□□□□ 0.28
BEST1O76090 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.81■□□□□ 0.28
BEST1O76090 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.81■□□□□ 0.28
BEST1O76090 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.81■□□□□ 0.28
BEST1O76090 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.81■□□□□ 0.28
BEST1O76090 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
BEST1O76090 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.81■□□□□ 0.28
BEST1O76090 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST1O76090 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BEST1O76090 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST1O76090 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.81■□□□□ 0.28
BEST1O76090 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.81■□□□□ 0.28
BEST1O76090 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST1O76090 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST1O76090 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BEST1O76090 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 BTBD7P1-201ENST00000447253 1453 ntBASIC16.8■□□□□ 0.28
BEST1O76090 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
BEST1O76090 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 TARDBPP1-201ENST00000442013 1203 ntBASIC16.8■□□□□ 0.28
BEST1O76090 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BEST1O76090 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST1O76090 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 HNRNPUP1-201ENST00000554987 333 ntBASIC16.8■□□□□ 0.28
BEST1O76090 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.8■□□□□ 0.28
BEST1O76090 AC097359.3-201ENST00000603982 1210 ntBASIC16.8■□□□□ 0.28
BEST1O76090 LINC01115-203ENST00000606068 577 ntBASIC16.8■□□□□ 0.28
BEST1O76090 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
BEST1O76090 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 Z97205.2-201ENST00000564697 1639 ntBASIC16.8■□□□□ 0.28
BEST1O76090 OR6D1P-203ENST00000641209 4860 ntBASIC16.8■□□□□ 0.28
BEST1O76090 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.8■□□□□ 0.28
BEST1O76090 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
BEST1O76090 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST1O76090 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST1O76090 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST1O76090 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST1O76090 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
BEST1O76090 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.79■□□□□ 0.28
BEST1O76090 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BEST1O76090 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BEST1O76090 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST1O76090 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.79■□□□□ 0.28
BEST1O76090 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.79■□□□□ 0.28
BEST1O76090 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST1O76090 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms