Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIOO75962 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIOO75962 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
TRIOO75962 CTBP2P4-201ENST00000513884 920 ntBASIC16.05■□□□□ 0.16
TRIOO75962 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIOO75962 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIOO75962 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIOO75962 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.05■□□□□ 0.16
TRIOO75962 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIOO75962 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIOO75962 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIOO75962 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 AC074338.1-201ENST00000416825 156 ntBASIC16.04■□□□□ 0.16
TRIOO75962 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.04■□□□□ 0.16
TRIOO75962 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIOO75962 CNN2P10-201ENST00000443067 918 ntBASIC16.04■□□□□ 0.16
TRIOO75962 RN7SL181P-201ENST00000462921 277 ntBASIC16.04■□□□□ 0.16
TRIOO75962 RN7SL11P-201ENST00000471305 293 ntBASIC16.04■□□□□ 0.16
TRIOO75962 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
TRIOO75962 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIOO75962 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIOO75962 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIOO75962 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIOO75962 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRIOO75962 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIOO75962 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIOO75962 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIOO75962 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIOO75962 CEP164P1-201ENST00000455142 418 ntBASIC16.04■□□□□ 0.16
TRIOO75962 AC023310.1-201ENST00000554836 735 ntBASIC16.04■□□□□ 0.16
TRIOO75962 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRIOO75962 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIOO75962 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIOO75962 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIOO75962 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIOO75962 AC134407.2-201ENST00000625089 1978 ntBASIC16.04■□□□□ 0.16
TRIOO75962 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
TRIOO75962 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.03■□□□□ 0.16
TRIOO75962 RN7SL774P-201ENST00000577467 290 ntBASIC16.03■□□□□ 0.16
TRIOO75962 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIOO75962 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIOO75962 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIOO75962 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIOO75962 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIOO75962 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIOO75962 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIOO75962 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIOO75962 RNF165-205ENST00000588679 2904 ntBASIC16.03■□□□□ 0.16
TRIOO75962 AL121723.1-201ENST00000445194 1519 ntBASIC16.03■□□□□ 0.16
TRIOO75962 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIOO75962 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRIOO75962 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIOO75962 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIOO75962 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIOO75962 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 PRKXP1-201ENST00000561423 1122 ntBASIC16.03■□□□□ 0.16
TRIOO75962 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRIOO75962 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIOO75962 AC004899.1-201ENST00000424687 1714 ntBASIC16.03■□□□□ 0.16
TRIOO75962 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIOO75962 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIOO75962 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIOO75962 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRIOO75962 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRIOO75962 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIOO75962 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIOO75962 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIOO75962 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIOO75962 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIOO75962 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIOO75962 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms