Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ZNF253O75346 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF253O75346 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF253O75346 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF253O75346 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF253O75346 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF253O75346 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF253O75346 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF253O75346 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF253O75346 AC138894.3-201ENST00000603787 634 ntBASIC12.62□□□□□ -0.39
ZNF253O75346 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF253O75346 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF253O75346 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF253O75346 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF253O75346 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF253O75346 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
ZNF253O75346 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF253O75346 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF253O75346 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF253O75346 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF253O75346 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 AC023908.3-201ENST00000564211 3047 ntBASIC12.62□□□□□ -0.39
ZNF253O75346 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF253O75346 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF253O75346 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ZNF253O75346 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 AP005117.1-202ENST00000581724 1908 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 MIR648-201ENST00000385046 94 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF253O75346 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 SCARNA2-201ENST00000458748 420 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 KRT18P21-201ENST00000515767 1272 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF253O75346 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF253O75346 AC006557.2-201ENST00000592985 1240 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 AC092119.3-201ENST00000612618 583 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 GGTLC5P-201ENST00000617623 998 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 AL355877.3-201ENST00000622820 899 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ZNF253O75346 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 PI4KAP1-204ENST00000612579 1703 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ZNF253O75346 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
ZNF253O75346 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ZNF253O75346 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 AC005089.1-201ENST00000619486 2241 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF253O75346 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 PRAL-201ENST00000624952 3286 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 AC129492.6-201ENST00000611383 1305 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF253O75346 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF253O75346 PPT1-215ENST00000641471 2368 ntBASIC12.61□□□□□ -0.39
ZNF253O75346 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ZNF253O75346 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF253O75346 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms