Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGA12O60330 AC026979.3-201ENST00000607315 403 ntBASIC15.97■□□□□ 0.15
PCDHGA12O60330 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGA12O60330 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA12O60330 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA12O60330 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA12O60330 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA12O60330 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGA12O60330 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA12O60330 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA12O60330 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA12O60330 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA12O60330 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA12O60330 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGA12O60330 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA12O60330 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA12O60330 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA12O60330 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 AL596257.1-201ENST00000641463 2694 ntBASIC15.96■□□□□ 0.15
PCDHGA12O60330 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 AC055876.2-201ENST00000531834 546 ntBASIC15.96■□□□□ 0.15
PCDHGA12O60330 AC132938.2-201ENST00000579188 680 ntBASIC15.96■□□□□ 0.15
PCDHGA12O60330 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 AL591163.1-201ENST00000641757 987 ntBASIC15.96■□□□□ 0.15
PCDHGA12O60330 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA12O60330 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 KRT8P12-202ENST00000472924 1397 ntBASIC15.96■□□□□ 0.15
PCDHGA12O60330 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
PCDHGA12O60330 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA12O60330 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA12O60330 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA12O60330 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA12O60330 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 NFIC-211ENST00000641145 8399 ntBASIC15.95■□□□□ 0.14
PCDHGA12O60330 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 AC079776.1-201ENST00000401540 1152 ntBASIC15.95■□□□□ 0.14
PCDHGA12O60330 SPDYE17-201ENST00000412399 783 ntBASIC15.95■□□□□ 0.14
PCDHGA12O60330 ACA64.2-201ENST00000459014 129 ntBASIC15.95■□□□□ 0.14
PCDHGA12O60330 SDHAP3-202ENST00000515467 728 ntBASIC15.95■□□□□ 0.14
PCDHGA12O60330 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 AC099568.2-201ENST00000609194 695 ntBASIC15.95■□□□□ 0.14
PCDHGA12O60330 AC004790.1-201ENST00000612686 536 ntBASIC15.95■□□□□ 0.14
PCDHGA12O60330 MIR6805-201ENST00000615055 62 ntBASIC15.95■□□□□ 0.14
PCDHGA12O60330 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.95■□□□□ 0.14
PCDHGA12O60330 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 AL033527.5-202ENST00000641632 1098 ntBASIC15.95■□□□□ 0.14
PCDHGA12O60330 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 SNX33P1-201ENST00000592116 1762 ntBASIC15.95■□□□□ 0.14
PCDHGA12O60330 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA12O60330 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA12O60330 AL662844.4-201ENST00000606367 2838 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms