Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 AC007787.1-201ENST00000588095 1583 ntBASIC17.1■□□□□ 0.33
CEP290O15078 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.1■□□□□ 0.33
CEP290O15078 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CEP290O15078 PIN4P1-201ENST00000451079 396 ntBASIC17.1■□□□□ 0.33
CEP290O15078 AC106794.1-201ENST00000506935 792 ntBASIC17.1■□□□□ 0.33
CEP290O15078 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.1■□□□□ 0.33
CEP290O15078 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.1■□□□□ 0.33
CEP290O15078 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.1■□□□□ 0.33
CEP290O15078 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.1■□□□□ 0.33
CEP290O15078 KRT8P35-201ENST00000483942 1338 ntBASIC17.1■□□□□ 0.33
CEP290O15078 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CEP290O15078 AC004899.1-201ENST00000424687 1714 ntBASIC17.1■□□□□ 0.33
CEP290O15078 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.1■□□□□ 0.33
CEP290O15078 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CEP290O15078 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CEP290O15078 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.09■□□□□ 0.33
CEP290O15078 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CEP290O15078 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CEP290O15078 AC004987.2-201ENST00000395959 1148 ntBASIC17.09■□□□□ 0.33
CEP290O15078 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.09■□□□□ 0.33
CEP290O15078 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.09■□□□□ 0.33
CEP290O15078 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.09■□□□□ 0.33
CEP290O15078 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.09■□□□□ 0.33
CEP290O15078 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CEP290O15078 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.09■□□□□ 0.33
CEP290O15078 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.09■□□□□ 0.33
CEP290O15078 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.09■□□□□ 0.33
CEP290O15078 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.09■□□□□ 0.33
CEP290O15078 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.09■□□□□ 0.33
CEP290O15078 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.09■□□□□ 0.33
CEP290O15078 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.09■□□□□ 0.33
CEP290O15078 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.09■□□□□ 0.33
CEP290O15078 EIF5AP2-201ENST00000585668 1047 ntBASIC17.09■□□□□ 0.33
CEP290O15078 AP001527.2-201ENST00000614441 631 ntBASIC17.09■□□□□ 0.33
CEP290O15078 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CEP290O15078 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.09■□□□□ 0.33
CEP290O15078 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CEP290O15078 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.09■□□□□ 0.33
CEP290O15078 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
CEP290O15078 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CEP290O15078 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CEP290O15078 RN7SKP214-201ENST00000364208 315 ntBASIC17.08■□□□□ 0.33
CEP290O15078 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.08■□□□□ 0.33
CEP290O15078 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CEP290O15078 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.08■□□□□ 0.33
CEP290O15078 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.08■□□□□ 0.33
CEP290O15078 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.08■□□□□ 0.33
CEP290O15078 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CEP290O15078 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CEP290O15078 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CEP290O15078 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEP290O15078 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.08■□□□□ 0.32
CEP290O15078 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEP290O15078 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEP290O15078 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEP290O15078 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CEP290O15078 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CEP290O15078 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.08■□□□□ 0.32
CEP290O15078 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CEP290O15078 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CEP290O15078 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.08■□□□□ 0.32
CEP290O15078 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.08■□□□□ 0.32
CEP290O15078 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.08■□□□□ 0.32
CEP290O15078 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.07■□□□□ 0.32
CEP290O15078 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 AC245100.5-201ENST00000452108 331 ntBASIC17.07■□□□□ 0.32
CEP290O15078 MARK2P5-201ENST00000507649 634 ntBASIC17.07■□□□□ 0.32
CEP290O15078 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.07■□□□□ 0.32
CEP290O15078 RN7SL596P-201ENST00000582123 288 ntBASIC17.07■□□□□ 0.32
CEP290O15078 MIR6842-201ENST00000612539 65 ntBASIC17.07■□□□□ 0.32
CEP290O15078 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CEP290O15078 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.07■□□□□ 0.32
CEP290O15078 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.07■□□□□ 0.32
CEP290O15078 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEP290O15078 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.07■□□□□ 0.32
CEP290O15078 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms