Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP4M1O00189 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.39□□□□□ -0.27
AP4M1O00189 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP4M1O00189 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP4M1O00189 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP4M1O00189 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.38□□□□□ -0.27
AP4M1O00189 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
AP4M1O00189 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
AP4M1O00189 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.38□□□□□ -0.27
AP4M1O00189 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
AP4M1O00189 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
AP4M1O00189 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.38□□□□□ -0.27
AP4M1O00189 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.38□□□□□ -0.27
AP4M1O00189 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.38□□□□□ -0.27
AP4M1O00189 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.38□□□□□ -0.27
AP4M1O00189 AC002347.1-201ENST00000569543 541 ntBASIC13.38□□□□□ -0.27
AP4M1O00189 OR7E47P-204ENST00000575924 449 ntBASIC13.38□□□□□ -0.27
AP4M1O00189 AC005412.3-201ENST00000580309 715 ntBASIC13.38□□□□□ -0.27
AP4M1O00189 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.38□□□□□ -0.27
AP4M1O00189 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
AP4M1O00189 AL671883.3-201ENST00000603274 991 ntBASIC13.38□□□□□ -0.27
AP4M1O00189 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
AP4M1O00189 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.38□□□□□ -0.27
AP4M1O00189 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
AP4M1O00189 FRMD8P1-201ENST00000440433 1524 ntBASIC13.38□□□□□ -0.27
AP4M1O00189 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
AP4M1O00189 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
AP4M1O00189 TUBB8P12-201ENST00000308911 1335 ntBASIC13.38□□□□□ -0.27
AP4M1O00189 TUBB7P-202ENST00000428444 1305 ntBASIC13.38□□□□□ -0.27
AP4M1O00189 TUBB8P7-204ENST00000567960 1332 ntBASIC13.38□□□□□ -0.27
AP4M1O00189 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP4M1O00189 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.38□□□□□ -0.27
AP4M1O00189 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
AP4M1O00189 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 AC079781.5-202ENST00000641784 3743 ntBASIC13.37□□□□□ -0.27
AP4M1O00189 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
AP4M1O00189 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.37□□□□□ -0.27
AP4M1O00189 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
AP4M1O00189 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 FAM185BP-201ENST00000443595 716 ntBASIC13.37□□□□□ -0.27
AP4M1O00189 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.37□□□□□ -0.27
AP4M1O00189 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.37□□□□□ -0.27
AP4M1O00189 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.37□□□□□ -0.27
AP4M1O00189 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
AP4M1O00189 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.37□□□□□ -0.27
AP4M1O00189 AC023141.13-201ENST00000604991 943 ntBASIC13.37□□□□□ -0.27
AP4M1O00189 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
AP4M1O00189 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
AP4M1O00189 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.37□□□□□ -0.27
AP4M1O00189 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP4M1O00189 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms