Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX39AO00148 AL596087.1-201ENST00000400979 1969 ntBASIC18.08■□□□□ 0.48
DDX39AO00148 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX39AO00148 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.08■□□□□ 0.48
DDX39AO00148 PCDHB19P-201ENST00000570871 2371 ntBASIC18.08■□□□□ 0.48
DDX39AO00148 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX39AO00148 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX39AO00148 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
DDX39AO00148 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 AC006449.5-201ENST00000610658 2098 ntBASIC18.07■□□□□ 0.48
DDX39AO00148 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
DDX39AO00148 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
DDX39AO00148 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX39AO00148 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
DDX39AO00148 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
DDX39AO00148 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 HAUS4P1-201ENST00000406739 1145 ntBASIC18.07■□□□□ 0.48
DDX39AO00148 FAM207CP-201ENST00000443486 507 ntBASIC18.07■□□□□ 0.48
DDX39AO00148 AC245100.5-201ENST00000452108 331 ntBASIC18.07■□□□□ 0.48
DDX39AO00148 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
DDX39AO00148 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX39AO00148 SPDYE18-201ENST00000510091 1050 ntBASIC18.07■□□□□ 0.48
DDX39AO00148 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.07■□□□□ 0.48
DDX39AO00148 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.07■□□□□ 0.48
DDX39AO00148 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX39AO00148 AC243562.2-201ENST00000561247 970 ntBASIC18.07■□□□□ 0.48
DDX39AO00148 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.07■□□□□ 0.48
DDX39AO00148 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.07■□□□□ 0.48
DDX39AO00148 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.07■□□□□ 0.48
DDX39AO00148 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX39AO00148 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX39AO00148 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
DDX39AO00148 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX39AO00148 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.07■□□□□ 0.48
DDX39AO00148 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
DDX39AO00148 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
DDX39AO00148 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
DDX39AO00148 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX39AO00148 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX39AO00148 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX39AO00148 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX39AO00148 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX39AO00148 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX39AO00148 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
DDX39AO00148 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
DDX39AO00148 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX39AO00148 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX39AO00148 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX39AO00148 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.06■□□□□ 0.48
DDX39AO00148 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX39AO00148 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX39AO00148 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX39AO00148 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX39AO00148 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX39AO00148 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX39AO00148 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX39AO00148 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX39AO00148 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX39AO00148 AC104794.3-201ENST00000566840 1248 ntBASIC18.06■□□□□ 0.48
DDX39AO00148 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.06■□□□□ 0.48
DDX39AO00148 MIR6069-201ENST00000620069 79 ntBASIC18.06■□□□□ 0.48
DDX39AO00148 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.06■□□□□ 0.48
DDX39AO00148 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX39AO00148 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX39AO00148 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX39AO00148 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX39AO00148 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
DDX39AO00148 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
DDX39AO00148 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX39AO00148 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX39AO00148 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX39AO00148 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX39AO00148 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX39AO00148 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX39AO00148 AP003680.1-201ENST00000598970 3660 ntBASIC18.05■□□□□ 0.48
DDX39AO00148 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX39AO00148 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
DDX39AO00148 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX39AO00148 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX39AO00148 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
DDX39AO00148 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms