Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 CICP23-201ENST00000605013 2741 ntBASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 NSUN5P1-202ENST00000421140 1535 ntBASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 NSUN5P2-203ENST00000457352 1529 ntBASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 AC005521.1-201ENST00000393351 872 ntBASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 ABCD1P5-201ENST00000445663 754 ntBASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 Z69720.1-201ENST00000601483 472 ntBASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 AP001350.2-201ENST00000625104 1094 ntBASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RCL1Q9Y2P8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 AC063952.2-201ENST00000498792 1227 ntBASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 AC093827.2-201ENST00000512654 315 ntBASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 AC064862.7-201ENST00000604520 867 ntBASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 AL139424.1-201ENST00000607572 797 ntBASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 AC012306.2-201ENST00000609350 630 ntBASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms