Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 BNIP3P18-201ENST00000593976 575 ntBASIC15.67■□□□□ 0.1
NDE1Q9NXR1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDE1Q9NXR1 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 AC233702.3-201ENST00000578656 1387 ntBASIC15.66■□□□□ 0.1
NDE1Q9NXR1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 HCG4-201ENST00000418983 998 ntBASIC15.66■□□□□ 0.1
NDE1Q9NXR1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 AC087163.2-201ENST00000457299 853 ntBASIC15.66■□□□□ 0.1
NDE1Q9NXR1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 LINC00552-201ENST00000625151 2579 ntBASIC15.66■□□□□ 0.1
NDE1Q9NXR1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.66■□□□□ 0.1
NDE1Q9NXR1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 ARMC10P1-201ENST00000313754 855 ntBASIC15.65■□□□□ 0.1
NDE1Q9NXR1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 POM121L3P-201ENST00000419331 1163 ntBASIC15.65■□□□□ 0.1
NDE1Q9NXR1 BX276092.5-203ENST00000456199 560 ntBASIC15.65■□□□□ 0.1
NDE1Q9NXR1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 AL121672.3-201ENST00000608644 468 ntBASIC15.65■□□□□ 0.1
NDE1Q9NXR1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NDE1Q9NXR1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms