Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 IFNL4P1-201ENST00000607083 540 ntBASIC15.9■□□□□ 0.14
MKS1Q9NXB0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MKS1Q9NXB0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.89■□□□□ 0.13
MKS1Q9NXB0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 AL122018.1-201ENST00000446607 2310 ntBASIC15.89■□□□□ 0.13
MKS1Q9NXB0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 KRT18P67-201ENST00000432816 1264 ntBASIC15.89■□□□□ 0.13
MKS1Q9NXB0 RHOQP3-201ENST00000437982 621 ntBASIC15.89■□□□□ 0.13
MKS1Q9NXB0 AC140658.5-201ENST00000438532 169 ntBASIC15.89■□□□□ 0.13
MKS1Q9NXB0 VN2R19P-201ENST00000442399 1052 ntBASIC15.89■□□□□ 0.13
MKS1Q9NXB0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 PRYP6-201ENST00000514804 343 ntBASIC15.89■□□□□ 0.13
MKS1Q9NXB0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 AL390755.1-201ENST00000623716 2027 ntBASIC15.89■□□□□ 0.13
MKS1Q9NXB0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
MKS1Q9NXB0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 AC096734.2-201ENST00000562054 433 ntBASIC15.88■□□□□ 0.13
MKS1Q9NXB0 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 AL445228.2-201ENST00000605589 952 ntBASIC15.88■□□□□ 0.13
MKS1Q9NXB0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 AC127383.1-201ENST00000444697 1800 ntBASIC15.88■□□□□ 0.13
MKS1Q9NXB0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MKS1Q9NXB0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms