Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 STK33P1-201ENST00000423835 1218 ntBASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 AC005225.4-201ENST00000557330 545 ntBASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 AC024267.1-201ENST00000582320 895 ntBASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CUEDC1Q9NWM3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 AL513523.2-202ENST00000427283 2040 ntBASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.61■□□□□ 0.09
CUEDC1Q9NWM3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 AC024909.3-201ENST00000611513 2257 ntBASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 INGX-202ENST00000489074 768 ntBASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 TERF1P3-201ENST00000505638 1227 ntBASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 AP001059.3-201ENST00000619053 235 ntBASIC15.6■□□□□ 0.09
CUEDC1Q9NWM3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms