Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 AC106886.4-201ENST00000623557 2502 ntBASIC17.87■□□□□ 0.45
VTA1Q9NP79 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTA1Q9NP79 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VTA1Q9NP79 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTA1Q9NP79 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTA1Q9NP79 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTA1Q9NP79 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTA1Q9NP79 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 SOCS2P1-201ENST00000417727 557 ntBASIC17.86■□□□□ 0.45
VTA1Q9NP79 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VTA1Q9NP79 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTA1Q9NP79 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VTA1Q9NP79 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTA1Q9NP79 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VTA1Q9NP79 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 AL049840.4-201ENST00000602422 811 ntBASIC17.85■□□□□ 0.45
VTA1Q9NP79 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.85■□□□□ 0.45
VTA1Q9NP79 AL022328.1-201ENST00000610050 478 ntBASIC17.85■□□□□ 0.45
VTA1Q9NP79 AL033527.4-201ENST00000641026 673 ntBASIC17.85■□□□□ 0.45
VTA1Q9NP79 PKD1P1-201ENST00000458669 6805 ntBASIC17.85■□□□□ 0.45
VTA1Q9NP79 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTA1Q9NP79 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.84■□□□□ 0.45
VTA1Q9NP79 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
VTA1Q9NP79 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTA1Q9NP79 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTA1Q9NP79 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.84■□□□□ 0.45
VTA1Q9NP79 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VTA1Q9NP79 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.84■□□□□ 0.45
VTA1Q9NP79 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.84■□□□□ 0.45
VTA1Q9NP79 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
VTA1Q9NP79 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms