Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 RPL17P45-201ENST00000586289 509 ntBASIC14.64□□□□□ -0.07
CHD8Q9HCK8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 AC073413.1-201ENST00000603927 732 ntBASIC14.64□□□□□ -0.07
CHD8Q9HCK8 AC244250.3-201ENST00000620749 366 ntBASIC14.64□□□□□ -0.07
CHD8Q9HCK8 AC051619.9-201ENST00000623237 597 ntBASIC14.64□□□□□ -0.07
CHD8Q9HCK8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.63□□□□□ -0.07
CHD8Q9HCK8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 AP002803.1-201ENST00000528836 498 ntBASIC14.63□□□□□ -0.07
CHD8Q9HCK8 AC103988.2-201ENST00000561804 725 ntBASIC14.63□□□□□ -0.07
CHD8Q9HCK8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 ALG1L6P-201ENST00000515248 758 ntBASIC14.63□□□□□ -0.07
CHD8Q9HCK8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 BNIP3P13-201ENST00000599968 566 ntBASIC14.63□□□□□ -0.07
CHD8Q9HCK8 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 AC007718.1-201ENST00000621078 280 ntBASIC14.63□□□□□ -0.07
CHD8Q9HCK8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.63□□□□□ -0.07
CHD8Q9HCK8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 AC004987.2-201ENST00000395959 1148 ntBASIC14.62□□□□□ -0.07
CHD8Q9HCK8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 AC013467.2-201ENST00000605472 835 ntBASIC14.62□□□□□ -0.07
CHD8Q9HCK8 AL161773.1-201ENST00000624845 863 ntBASIC14.62□□□□□ -0.07
CHD8Q9HCK8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.62□□□□□ -0.07
CHD8Q9HCK8 SLED1-202ENST00000512051 380 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms