Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 AC022144.1-201ENST00000602255 1580 ntBASIC18.64■□□□□ 0.58
VAT1LQ9HCJ6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 SPDYE17-201ENST00000412399 783 ntBASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 AL512361.1-201ENST00000554200 418 ntBASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 AC009407.1-201ENST00000568958 598 ntBASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 RN7SL204P-201ENST00000582831 262 ntBASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 AL844908.2-201ENST00000609461 460 ntBASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VAT1LQ9HCJ6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 AP003680.1-201ENST00000598970 3660 ntBASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.63■□□□□ 0.57
VAT1LQ9HCJ6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 AC134407.2-201ENST00000625089 1978 ntBASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 FER1L4-210ENST00000615531 5998 ntBASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 LINC02560-201ENST00000596379 459 ntBASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 AL033527.5-202ENST00000641632 1098 ntBASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 BNIP3P1-202ENST00000550043 1585 ntBASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAT1LQ9HCJ6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms