Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SP110Q9HB58 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.51■□□□□ 0.23
SP110Q9HB58 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SP110Q9HB58 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SP110Q9HB58 CNN2P2-201ENST00000443536 909 ntBASIC16.51■□□□□ 0.23
SP110Q9HB58 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.51■□□□□ 0.23
SP110Q9HB58 CNN2P3-201ENST00000450201 906 ntBASIC16.51■□□□□ 0.23
SP110Q9HB58 AC069262.1-201ENST00000539058 672 ntBASIC16.51■□□□□ 0.23
SP110Q9HB58 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.51■□□□□ 0.23
SP110Q9HB58 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.51■□□□□ 0.23
SP110Q9HB58 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 AL136317.3-201ENST00000618497 906 ntBASIC16.51■□□□□ 0.23
SP110Q9HB58 AC093028.1-201ENST00000622998 982 ntBASIC16.51■□□□□ 0.23
SP110Q9HB58 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.51■□□□□ 0.23
SP110Q9HB58 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.51■□□□□ 0.23
SP110Q9HB58 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SP110Q9HB58 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SP110Q9HB58 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.51■□□□□ 0.23
SP110Q9HB58 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.51■□□□□ 0.23
SP110Q9HB58 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SP110Q9HB58 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
SP110Q9HB58 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.51■□□□□ 0.23
SP110Q9HB58 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SP110Q9HB58 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SP110Q9HB58 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SP110Q9HB58 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SP110Q9HB58 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SP110Q9HB58 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.5■□□□□ 0.23
SP110Q9HB58 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SP110Q9HB58 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SP110Q9HB58 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SP110Q9HB58 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.5■□□□□ 0.23
SP110Q9HB58 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.5■□□□□ 0.23
SP110Q9HB58 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.5■□□□□ 0.23
SP110Q9HB58 AL139010.1-201ENST00000454878 894 ntBASIC16.5■□□□□ 0.23
SP110Q9HB58 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.5■□□□□ 0.23
SP110Q9HB58 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.5■□□□□ 0.23
SP110Q9HB58 AL512356.2-201ENST00000546955 174 ntBASIC16.5■□□□□ 0.23
SP110Q9HB58 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.5■□□□□ 0.23
SP110Q9HB58 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.5■□□□□ 0.23
SP110Q9HB58 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.5■□□□□ 0.23
SP110Q9HB58 MIR4453-201ENST00000584019 89 ntBASIC16.5■□□□□ 0.23
SP110Q9HB58 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.5■□□□□ 0.23
SP110Q9HB58 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.5■□□□□ 0.23
SP110Q9HB58 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.5■□□□□ 0.23
SP110Q9HB58 Z92544.3-201ENST00000624747 417 ntBASIC16.5■□□□□ 0.23
SP110Q9HB58 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SP110Q9HB58 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.5■□□□□ 0.23
SP110Q9HB58 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.5■□□□□ 0.23
SP110Q9HB58 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.5■□□□□ 0.23
SP110Q9HB58 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.5■□□□□ 0.23
SP110Q9HB58 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.5■□□□□ 0.23
SP110Q9HB58 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.5■□□□□ 0.23
SP110Q9HB58 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SP110Q9HB58 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
SP110Q9HB58 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SP110Q9HB58 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.49■□□□□ 0.23
SP110Q9HB58 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SP110Q9HB58 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SP110Q9HB58 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.49■□□□□ 0.23
SP110Q9HB58 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SP110Q9HB58 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SP110Q9HB58 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.49■□□□□ 0.23
SP110Q9HB58 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms