Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRF2Q9HAW0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 AL592309.1-201ENST00000443127 649 ntBASIC15.39■□□□□ 0.05
BRF2Q9HAW0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 DNAJB3-201ENST00000446806 729 ntBASIC15.39■□□□□ 0.05
BRF2Q9HAW0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 AL671883.3-201ENST00000603274 991 ntBASIC15.39■□□□□ 0.05
BRF2Q9HAW0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 AC055717.3-201ENST00000622967 595 ntBASIC15.39■□□□□ 0.05
BRF2Q9HAW0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 BNIP3P1-202ENST00000550043 1585 ntBASIC15.39■□□□□ 0.05
BRF2Q9HAW0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.39■□□□□ 0.05
BRF2Q9HAW0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 AL139010.1-201ENST00000454878 894 ntBASIC15.38■□□□□ 0.05
BRF2Q9HAW0 ALG1L5P-201ENST00000482043 771 ntBASIC15.38■□□□□ 0.05
BRF2Q9HAW0 AC069335.1-201ENST00000489972 472 ntBASIC15.38■□□□□ 0.05
BRF2Q9HAW0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 AC005829.1-201ENST00000570002 483 ntBASIC15.38■□□□□ 0.05
BRF2Q9HAW0 AC026979.3-201ENST00000607315 403 ntBASIC15.38■□□□□ 0.05
BRF2Q9HAW0 AC092384.3-202ENST00000564646 2873 ntBASIC15.38■□□□□ 0.05
BRF2Q9HAW0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 UXT-AS1-201ENST00000590504 1525 ntBASIC15.38■□□□□ 0.05
BRF2Q9HAW0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.38■□□□□ 0.05
BRF2Q9HAW0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms