Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 AC073389.1-201ENST00000595595 795 ntBASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 AC068137.2-201ENST00000605408 478 ntBASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 AL161645.1-201ENST00000622716 1255 ntBASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
TUBB1Q9H4B7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 AC068418.2-201ENST00000577309 3703 ntBASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.52■□□□□ 0.07
TUBB1Q9H4B7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 AC074386.1-202ENST00000463561 864 ntBASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 PDPK2P-202ENST00000562415 1191 ntBASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 AC061975.2-201ENST00000581722 295 ntBASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB1Q9H4B7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 BNIP3P1-202ENST00000550043 1585 ntBASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms