Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 C1QBPP1-201ENST00000400117 770 ntBASIC17.48■□□□□ 0.39
HIPK3Q9H422 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 BAATP1-201ENST00000412284 1225 ntBASIC17.48■□□□□ 0.39
HIPK3Q9H422 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 AC079316.1-201ENST00000548397 411 ntBASIC17.48■□□□□ 0.39
HIPK3Q9H422 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 AC004945.1-201ENST00000416738 983 ntBASIC17.47■□□□□ 0.39
HIPK3Q9H422 AC016694.1-201ENST00000434179 700 ntBASIC17.47■□□□□ 0.39
HIPK3Q9H422 GOLGA2P4-201ENST00000441462 777 ntBASIC17.47■□□□□ 0.39
HIPK3Q9H422 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 AC120045.2-201ENST00000567334 178 ntBASIC17.47■□□□□ 0.39
HIPK3Q9H422 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 AL049840.4-201ENST00000602422 811 ntBASIC17.47■□□□□ 0.39
HIPK3Q9H422 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 AC009542.2-202ENST00000619004 1067 ntBASIC17.47■□□□□ 0.39
HIPK3Q9H422 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 AL139099.5-201ENST00000635274 300 ntBASIC17.47■□□□□ 0.39
HIPK3Q9H422 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIPK3Q9H422 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HIPK3Q9H422 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK3Q9H422 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK3Q9H422 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK3Q9H422 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK3Q9H422 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK3Q9H422 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK3Q9H422 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK3Q9H422 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK3Q9H422 MIR1247-201ENST00000408206 136 ntBASIC17.46■□□□□ 0.39
HIPK3Q9H422 GPAA1P2-201ENST00000417923 928 ntBASIC17.46■□□□□ 0.39
HIPK3Q9H422 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 CLUHP6-201ENST00000580789 941 ntBASIC17.46■□□□□ 0.39
HIPK3Q9H422 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK3Q9H422 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK3Q9H422 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.46■□□□□ 0.39
HIPK3Q9H422 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK3Q9H422 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms