Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NKX6-2Q9C056 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 AC010460.3-201ENST00000511359 1579 ntBASIC13.11□□□□□ -0.31
NKX6-2Q9C056 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 AP003733.1-201ENST00000491725 852 ntBASIC13.11□□□□□ -0.31
NKX6-2Q9C056 AC122714.2-201ENST00000502787 707 ntBASIC13.11□□□□□ -0.31
NKX6-2Q9C056 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 MIR4785-201ENST00000585005 73 ntBASIC13.11□□□□□ -0.31
NKX6-2Q9C056 AP000525.1-201ENST00000608286 694 ntBASIC13.11□□□□□ -0.31
NKX6-2Q9C056 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 AGAP7P-201ENST00000582299 2062 ntBASIC13.11□□□□□ -0.31
NKX6-2Q9C056 AGAP14-201ENST00000624701 2060 ntBASIC13.11□□□□□ -0.31
NKX6-2Q9C056 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX6-2Q9C056 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 AL353692.3-201ENST00000407031 1396 ntBASIC13.1□□□□□ -0.31
NKX6-2Q9C056 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 ID1-201ENST00000376105 1233 ntBASIC13.1□□□□□ -0.31
NKX6-2Q9C056 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 IGHGP-201ENST00000390555 1178 ntBASIC13.1□□□□□ -0.31
NKX6-2Q9C056 MIR1238-201ENST00000408483 83 ntBASIC13.1□□□□□ -0.31
NKX6-2Q9C056 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms