Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 AC141586.1-203ENST00000567242 366 ntBASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 AP001505.2-201ENST00000616815 443 ntBASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 AC009084.3-201ENST00000623356 437 ntBASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 AC084018.2-201ENST00000613093 2607 ntBASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 AC080080.1-201ENST00000625121 2420 ntBASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 PKD1P5-201ENST00000532415 10291 ntBASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNTNAP3Q9BZ76 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 MIR769-201ENST00000390225 118 ntBASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 AC091167.2-201ENST00000579581 588 ntBASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 MIR4741-201ENST00000579822 90 ntBASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 MIR4492-201ENST00000581627 80 ntBASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms