Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 AC010491.1-201ENST00000563101 2797 ntBASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPAP1Q9BWH6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 DFFBP1-201ENST00000433250 979 ntBASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 RN7SL618P-201ENST00000477850 296 ntBASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 AL512361.1-201ENST00000554200 418 ntBASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 AC104794.3-201ENST00000566840 1248 ntBASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 MIR4321-201ENST00000592276 80 ntBASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 AC004790.1-201ENST00000612686 536 ntBASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 AL596257.1-201ENST00000641463 2694 ntBASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.47■□□□□ 0.71
RPAP1Q9BWH6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPAP1Q9BWH6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 AL353779.1-201ENST00000434793 351 ntBASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 AC011270.2-201ENST00000624293 2550 ntBASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 LINC00554-201ENST00000564841 3011 ntBASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 AC069224.1-201ENST00000566372 1715 ntBASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 AL391825.1-201ENST00000457671 1364 ntBASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPAP1Q9BWH6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms