Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 FAM58CP-201ENST00000435741 640 ntBASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 DNAJB3-202ENST00000449667 1266 ntBASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 SNHG9-202ENST00000564014 471 ntBASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 AL596442.2-201ENST00000610240 980 ntBASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 AC112504.1-201ENST00000623415 1841 ntBASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 MIR648-201ENST00000385046 94 ntBASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 AC005829.1-201ENST00000570002 483 ntBASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
YIPF4Q9BSR8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.21■□□□□ 0.02
YIPF4Q9BSR8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
YIPF4Q9BSR8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
YIPF4Q9BSR8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
YIPF4Q9BSR8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
YIPF4Q9BSR8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
YIPF4Q9BSR8 AP002414.2-201ENST00000591780 3365 ntBASIC15.21■□□□□ 0.02
YIPF4Q9BSR8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
YIPF4Q9BSR8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 AC105917.1-201ENST00000506637 2539 ntBASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 AC069224.1-201ENST00000566372 1715 ntBASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms