Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.29□□□□□ -0.44
VGLL1Q99990 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
VGLL1Q99990 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.29□□□□□ -0.44
VGLL1Q99990 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 AC104581.4-201ENST00000623126 3052 ntBASIC12.28□□□□□ -0.44
VGLL1Q99990 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.28□□□□□ -0.44
VGLL1Q99990 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.28□□□□□ -0.44
VGLL1Q99990 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.28□□□□□ -0.44
VGLL1Q99990 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.28□□□□□ -0.44
VGLL1Q99990 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.28□□□□□ -0.44
VGLL1Q99990 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.28□□□□□ -0.44
VGLL1Q99990 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
VGLL1Q99990 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.28□□□□□ -0.44
VGLL1Q99990 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.28□□□□□ -0.44
VGLL1Q99990 CLEC4GP1-201ENST00000596555 870 ntBASIC12.28□□□□□ -0.44
VGLL1Q99990 AL356488.2-201ENST00000602755 427 ntBASIC12.28□□□□□ -0.44
VGLL1Q99990 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.28□□□□□ -0.44
VGLL1Q99990 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.28□□□□□ -0.44
VGLL1Q99990 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VGLL1Q99990 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.28□□□□□ -0.44
VGLL1Q99990 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
VGLL1Q99990 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.28□□□□□ -0.44
VGLL1Q99990 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VGLL1Q99990 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.28□□□□□ -0.44
VGLL1Q99990 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VGLL1Q99990 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
VGLL1Q99990 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.27□□□□□ -0.44
VGLL1Q99990 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VGLL1Q99990 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VGLL1Q99990 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.27□□□□□ -0.44
VGLL1Q99990 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
VGLL1Q99990 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VGLL1Q99990 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VGLL1Q99990 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VGLL1Q99990 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VGLL1Q99990 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.27□□□□□ -0.44
VGLL1Q99990 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VGLL1Q99990 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.27□□□□□ -0.44
VGLL1Q99990 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.27□□□□□ -0.44
VGLL1Q99990 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.27□□□□□ -0.44
VGLL1Q99990 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
VGLL1Q99990 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.27□□□□□ -0.45
VGLL1Q99990 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
VGLL1Q99990 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.27□□□□□ -0.45
VGLL1Q99990 MRPL20P1-201ENST00000400819 433 ntBASIC12.27□□□□□ -0.45
VGLL1Q99990 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.27□□□□□ -0.45
VGLL1Q99990 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.27□□□□□ -0.45
VGLL1Q99990 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.27□□□□□ -0.45
VGLL1Q99990 RNPS1P1-201ENST00000507437 918 ntBASIC12.27□□□□□ -0.45
VGLL1Q99990 AC073648.2-201ENST00000510116 352 ntBASIC12.27□□□□□ -0.45
VGLL1Q99990 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VGLL1Q99990 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.27□□□□□ -0.45
VGLL1Q99990 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.27□□□□□ -0.45
VGLL1Q99990 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.27□□□□□ -0.45
VGLL1Q99990 MIR4515-201ENST00000584082 81 ntBASIC12.27□□□□□ -0.45
VGLL1Q99990 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.27□□□□□ -0.45
VGLL1Q99990 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms