Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.66□□□□□ -0.22
CLCC1Q96S66 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 PRYP5-201ENST00000451909 266 ntBASIC13.66□□□□□ -0.22
CLCC1Q96S66 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 AC139887.3-201ENST00000568585 713 ntBASIC13.66□□□□□ -0.22
CLCC1Q96S66 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 AC022532.1-201ENST00000624563 1728 ntBASIC13.66□□□□□ -0.22
CLCC1Q96S66 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLCC1Q96S66 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.66□□□□□ -0.22
CLCC1Q96S66 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 AC073648.2-201ENST00000510116 352 ntBASIC13.65□□□□□ -0.22
CLCC1Q96S66 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 AC021087.4-201ENST00000563761 564 ntBASIC13.65□□□□□ -0.22
CLCC1Q96S66 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 AL353135.1-201ENST00000606729 504 ntBASIC13.65□□□□□ -0.22
CLCC1Q96S66 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 AC026748.1-201ENST00000624349 3251 ntBASIC13.65□□□□□ -0.22
CLCC1Q96S66 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLCC1Q96S66 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLCC1Q96S66 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CLCC1Q96S66 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CLCC1Q96S66 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.65□□□□□ -0.23
CLCC1Q96S66 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms