Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX27Q96L92 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX27Q96L92 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX27Q96L92 PIN1P1-201ENST00000412108 996 ntBASIC17.31■□□□□ 0.36
SNX27Q96L92 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX27Q96L92 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SNX27Q96L92 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX27Q96L92 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.31■□□□□ 0.36
SNX27Q96L92 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.31■□□□□ 0.36
SNX27Q96L92 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.31■□□□□ 0.36
SNX27Q96L92 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.31■□□□□ 0.36
SNX27Q96L92 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX27Q96L92 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX27Q96L92 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.31■□□□□ 0.36
SNX27Q96L92 AC074044.1-201ENST00000609673 707 ntBASIC17.31■□□□□ 0.36
SNX27Q96L92 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.31■□□□□ 0.36
SNX27Q96L92 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX27Q96L92 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SNX27Q96L92 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SNX27Q96L92 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX27Q96L92 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
SNX27Q96L92 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX27Q96L92 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX27Q96L92 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SNX27Q96L92 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.3■□□□□ 0.36
SNX27Q96L92 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX27Q96L92 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SNX27Q96L92 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 AC079328.2-201ENST00000561241 3354 ntBASIC17.3■□□□□ 0.36
SNX27Q96L92 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
SNX27Q96L92 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.3■□□□□ 0.36
SNX27Q96L92 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX27Q96L92 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.3■□□□□ 0.36
SNX27Q96L92 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SNX27Q96L92 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SNX27Q96L92 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 GNAQP1-201ENST00000444815 1067 ntBASIC17.3■□□□□ 0.36
SNX27Q96L92 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.3■□□□□ 0.36
SNX27Q96L92 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.3■□□□□ 0.36
SNX27Q96L92 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.3■□□□□ 0.36
SNX27Q96L92 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 MIR6787-201ENST00000616675 61 ntBASIC17.3■□□□□ 0.36
SNX27Q96L92 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX27Q96L92 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.3■□□□□ 0.36
SNX27Q96L92 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SNX27Q96L92 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX27Q96L92 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SNX27Q96L92 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX27Q96L92 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.29■□□□□ 0.36
SNX27Q96L92 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX27Q96L92 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SNX27Q96L92 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
SNX27Q96L92 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX27Q96L92 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SNX27Q96L92 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.29■□□□□ 0.36
SNX27Q96L92 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.29■□□□□ 0.36
SNX27Q96L92 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.29■□□□□ 0.36
SNX27Q96L92 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.29■□□□□ 0.36
SNX27Q96L92 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SNX27Q96L92 SRD5A3P1-201ENST00000603021 949 ntBASIC17.29■□□□□ 0.36
SNX27Q96L92 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX27Q96L92 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.29■□□□□ 0.36
SNX27Q96L92 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.29■□□□□ 0.36
SNX27Q96L92 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SNX27Q96L92 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX27Q96L92 Z97205.2-201ENST00000564697 1639 ntBASIC17.29■□□□□ 0.36
SNX27Q96L92 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX27Q96L92 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX27Q96L92 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SNX27Q96L92 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX27Q96L92 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms