Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 AC104640.1-201ENST00000562617 2109 ntBASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 AC126177.1-201ENST00000547829 2218 ntBASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 UPF3AP3-201ENST00000420996 769 ntBASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 FAM58DP-201ENST00000428076 619 ntBASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 MIR4313-201ENST00000580760 101 ntBASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.7■□□□□ 0.1
PDLIM5Q96HC4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 PHKG1P2-201ENST00000457537 863 ntBASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM5Q96HC4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 TMBIM7P-203ENST00000641617 1718 ntBASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 AC105250.1-201ENST00000509378 2057 ntBASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 GPS2P2-201ENST00000430745 888 ntBASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms