Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 PMPCAP1-201ENST00000508114 1576 ntBASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 TPSP2-201ENST00000561760 610 ntBASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 AP005901.3-202ENST00000581653 237 ntBASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 AC007686.3-201ENST00000619017 3487 ntBASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 AC105250.1-201ENST00000509378 2057 ntBASIC16.3■□□□□ 0.2
CHMP6Q96FZ7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 AC112693.3-201ENST00000624819 1983 ntBASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 DRAXINP1-201ENST00000437611 948 ntBASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 KRT17P6-201ENST00000453795 1220 ntBASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 AC092119.3-201ENST00000612618 583 ntBASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 AL365209.1-201ENST00000624418 6473 ntBASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 NSUN5P1-202ENST00000421140 1535 ntBASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 NSUN5P2-203ENST00000457352 1529 ntBASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 TP73-AS1-210ENST00000637775 1455 ntBASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.29■□□□□ 0.2
CHMP6Q96FZ7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 AL590787.1-201ENST00000568856 1315 ntBASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 AP002383.4-201ENST00000442518 975 ntBASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms