Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTP4Q96DX8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RTP4Q96DX8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTP4Q96DX8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTP4Q96DX8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTP4Q96DX8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
RTP4Q96DX8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTP4Q96DX8 AC018892.3-201ENST00000623986 2499 ntBASIC16.39■□□□□ 0.21
RTP4Q96DX8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.39■□□□□ 0.21
RTP4Q96DX8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.39■□□□□ 0.21
RTP4Q96DX8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTP4Q96DX8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 SPDYE11-202ENST00000450699 704 ntBASIC16.38■□□□□ 0.21
RTP4Q96DX8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 SPDYE9P-201ENST00000570642 692 ntBASIC16.38■□□□□ 0.21
RTP4Q96DX8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 SPDYE10P-202ENST00000612005 668 ntBASIC16.38■□□□□ 0.21
RTP4Q96DX8 SPDYE8P-202ENST00000612377 668 ntBASIC16.38■□□□□ 0.21
RTP4Q96DX8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RTP4Q96DX8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTP4Q96DX8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 CYP4F24P-201ENST00000586049 1580 ntBASIC16.37■□□□□ 0.21
RTP4Q96DX8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 AC087481.3-201ENST00000602886 1894 ntBASIC16.37■□□□□ 0.21
RTP4Q96DX8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 AC006486.2-201ENST00000624246 2199 ntBASIC16.37■□□□□ 0.21
RTP4Q96DX8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTP4Q96DX8 AC006058.4-201ENST00000624016 1670 ntBASIC16.37■□□□□ 0.21
RTP4Q96DX8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RTP4Q96DX8 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms