Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 AC020658.6-201ENST00000623564 1870 ntBASIC15.54■□□□□ 0.08
VPS33AQ96AX1 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 AC006058.4-201ENST00000624016 1670 ntBASIC15.54■□□□□ 0.08
VPS33AQ96AX1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 AC012640.2-201ENST00000561606 901 ntBASIC15.54■□□□□ 0.08
VPS33AQ96AX1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 AL031055.1-201ENST00000606362 631 ntBASIC15.54■□□□□ 0.08
VPS33AQ96AX1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS33AQ96AX1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 HNRNPDP1-201ENST00000439535 754 ntBASIC15.53■□□□□ 0.08
VPS33AQ96AX1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 AC105339.3-201ENST00000560043 636 ntBASIC15.53■□□□□ 0.08
VPS33AQ96AX1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 IFNL4P1-201ENST00000607083 540 ntBASIC15.53■□□□□ 0.08
VPS33AQ96AX1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS33AQ96AX1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VPS33AQ96AX1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS33AQ96AX1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS33AQ96AX1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS33AQ96AX1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
VPS33AQ96AX1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms