Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.49□□□□□ -0.09
CPNE4Q96A23 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 AC027796.2-201ENST00000575326 344 ntBASIC14.49□□□□□ -0.09
CPNE4Q96A23 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CPNE4Q96A23 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE4Q96A23 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 AL662844.4-201ENST00000606367 2838 ntBASIC14.48□□□□□ -0.09
CPNE4Q96A23 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 AL158211.3-201ENST00000607385 239 ntBASIC14.48□□□□□ -0.09
CPNE4Q96A23 RN7SL828P-201ENST00000607615 303 ntBASIC14.48□□□□□ -0.09
CPNE4Q96A23 AC093512.1-201ENST00000617969 520 ntBASIC14.48□□□□□ -0.09
CPNE4Q96A23 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CPNE4Q96A23 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms