Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 AC008677.1-201ENST00000519230 1561 ntBASIC14.15□□□□□ -0.14
SPTSSAQ969W0 AP001282.1-201ENST00000531301 1499 ntBASIC14.15□□□□□ -0.14
SPTSSAQ969W0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 AL135744.1-201ENST00000565098 629 ntBASIC14.15□□□□□ -0.14
SPTSSAQ969W0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 AC073389.1-201ENST00000595595 795 ntBASIC14.15□□□□□ -0.14
SPTSSAQ969W0 SPTSSB-204ENST00000617024 1292 ntBASIC14.15□□□□□ -0.14
SPTSSAQ969W0 AC008267.7-201ENST00000624570 1194 ntBASIC14.15□□□□□ -0.14
SPTSSAQ969W0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 AP005117.1-202ENST00000581724 1908 ntBASIC14.15□□□□□ -0.14
SPTSSAQ969W0 PAUPAR-201ENST00000630360 2965 ntBASIC14.15□□□□□ -0.14
SPTSSAQ969W0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SPTSSAQ969W0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SPTSSAQ969W0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 PCDHA3-202ENST00000532566 4594 ntBASIC14.14□□□□□ -0.15
SPTSSAQ969W0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 ACTG1P14-201ENST00000446382 1122 ntBASIC14.14□□□□□ -0.15
SPTSSAQ969W0 SPDYE11-202ENST00000450699 704 ntBASIC14.14□□□□□ -0.15
SPTSSAQ969W0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.14□□□□□ -0.15
SPTSSAQ969W0 SPDYE9P-201ENST00000570642 692 ntBASIC14.14□□□□□ -0.15
SPTSSAQ969W0 SPDYE10P-202ENST00000612005 668 ntBASIC14.14□□□□□ -0.15
SPTSSAQ969W0 SPDYE8P-202ENST00000612377 668 ntBASIC14.14□□□□□ -0.15
SPTSSAQ969W0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSAQ969W0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.13□□□□□ -0.15
SPTSSAQ969W0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms