Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 PHKG1P2-201ENST00000457537 863 ntBASIC18.89■□□□□ 0.61
STAG1Q8WVM7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 TERF1P3-201ENST00000505638 1227 ntBASIC18.89■□□□□ 0.61
STAG1Q8WVM7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 PCDHA1-201ENST00000378133 2726 ntBASIC18.89■□□□□ 0.61
STAG1Q8WVM7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 AC022144.1-201ENST00000602255 1580 ntBASIC18.89■□□□□ 0.61
STAG1Q8WVM7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
STAG1Q8WVM7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 HNRNPUP1-201ENST00000554987 333 ntBASIC18.88■□□□□ 0.61
STAG1Q8WVM7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.88■□□□□ 0.61
STAG1Q8WVM7 AL450472.2-201ENST00000603663 1156 ntBASIC18.88■□□□□ 0.61
STAG1Q8WVM7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
STAG1Q8WVM7 AC018892.3-201ENST00000623986 2499 ntBASIC18.88■□□□□ 0.61
STAG1Q8WVM7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 AC025048.3-201ENST00000590609 569 ntBASIC18.87■□□□□ 0.61
STAG1Q8WVM7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 AC005702.4-201ENST00000618393 416 ntBASIC18.87■□□□□ 0.61
STAG1Q8WVM7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms