Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 RFPL4AP1-201ENST00000530883 850 ntBASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 RARRES2P9-201ENST00000565168 469 ntBASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 AL627223.1-201ENST00000416693 442 ntBASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 TSEN15P1-201ENST00000423257 515 ntBASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 CYMP-203ENST00000474680 1263 ntBASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 AC243562.2-201ENST00000561247 970 ntBASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 AC004835.2-201ENST00000603762 682 ntBASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCDH19Q8TAB3 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 AC018892.3-201ENST00000623986 2499 ntBASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 GPS2P2-201ENST00000430745 888 ntBASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 ALG1L8P-201ENST00000533887 760 ntBASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 AC093028.1-201ENST00000622998 982 ntBASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH19Q8TAB3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms