Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 AC015911.4-201ENST00000588022 1070 ntBASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 AC008677.1-201ENST00000519230 1561 ntBASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 AC105021.1-202ENST00000570572 669 ntBASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 Z92544.3-201ENST00000624747 417 ntBASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC148Q8NFR7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 AC067863.1-201ENST00000494933 530 ntBASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 MIR4453-201ENST00000584019 89 ntBASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 AC093028.1-201ENST00000622998 982 ntBASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC148Q8NFR7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 AC069224.1-201ENST00000566372 1715 ntBASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms