Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 AC008677.1-201ENST00000519230 1561 ntBASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 MIR346-201ENST00000362234 95 ntBASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 IGHV3-62-201ENST00000520057 340 ntBASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 AC005829.1-201ENST00000570002 483 ntBASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TTC9CQ8N5M4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 GPX1P2-201ENST00000429271 606 ntBASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 AC079140.1-201ENST00000508039 487 ntBASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 KRT8P48-201ENST00000515599 1220 ntBASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 LINC01225-203ENST00000563550 1244 ntBASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms