Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AL671883.3-201ENST00000603274 991 ntBASIC18.15■□□□□ 0.5
SHC4Q6S5L8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 REXO1L1P-202ENST00000608646 1974 ntBASIC18.15■□□□□ 0.5
SHC4Q6S5L8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.14■□□□□ 0.5
SHC4Q6S5L8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SHC4Q6S5L8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
SHC4Q6S5L8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 YBX2P1-201ENST00000394192 760 ntBASIC18.14■□□□□ 0.49
SHC4Q6S5L8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 RNA5SP410-201ENST00000516285 106 ntBASIC18.14■□□□□ 0.49
SHC4Q6S5L8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC4Q6S5L8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 AC004832.2-201ENST00000426397 482 ntBASIC18.13■□□□□ 0.49
SHC4Q6S5L8 SPDYE11-202ENST00000450699 704 ntBASIC18.13■□□□□ 0.49
SHC4Q6S5L8 ALG1L5P-201ENST00000482043 771 ntBASIC18.13■□□□□ 0.49
SHC4Q6S5L8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 SPDYE9P-201ENST00000570642 692 ntBASIC18.13■□□□□ 0.49
SHC4Q6S5L8 SPDYE10P-202ENST00000612005 668 ntBASIC18.13■□□□□ 0.49
SHC4Q6S5L8 SPDYE8P-202ENST00000612377 668 ntBASIC18.13■□□□□ 0.49
SHC4Q6S5L8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 C20orf181-201ENST00000623918 480 ntBASIC18.13■□□□□ 0.49
SHC4Q6S5L8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC4Q6S5L8 AC006486.2-201ENST00000624246 2199 ntBASIC18.13■□□□□ 0.49
SHC4Q6S5L8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC4Q6S5L8 AC069335.1-201ENST00000489972 472 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms