Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MIR4751-201ENST00000578027 74 ntBASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 PGM5P2-202ENST00000637225 1043 ntBASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 GGT4P-201ENST00000623672 1708 ntBASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 PMPCAP1-201ENST00000508114 1576 ntBASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 CDC14C-201ENST00000428251 1719 ntBASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXR1Q6PIV2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 LINC02447-202ENST00000501888 2146 ntBASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 METTL21AP1-201ENST00000438852 635 ntBASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 KRT18P2-201ENST00000447938 1258 ntBASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 LINC02084-201ENST00000606069 1096 ntBASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 AC073592.5-201ENST00000624854 528 ntBASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms