Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.01■□□□□ 0.31
VARS2Q5ST30 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VARS2Q5ST30 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VARS2Q5ST30 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.01■□□□□ 0.31
VARS2Q5ST30 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.01■□□□□ 0.31
VARS2Q5ST30 U91328.1-201ENST00000437528 223 ntBASIC17.01■□□□□ 0.31
VARS2Q5ST30 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 LINC01115-203ENST00000606068 577 ntBASIC17.01■□□□□ 0.31
VARS2Q5ST30 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
VARS2Q5ST30 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VARS2Q5ST30 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VARS2Q5ST30 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.01■□□□□ 0.31
VARS2Q5ST30 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VARS2Q5ST30 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.01■□□□□ 0.31
VARS2Q5ST30 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
VARS2Q5ST30 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VARS2Q5ST30 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
VARS2Q5ST30 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
VARS2Q5ST30 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VARS2Q5ST30 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VARS2Q5ST30 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17■□□□□ 0.31
VARS2Q5ST30 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17■□□□□ 0.31
VARS2Q5ST30 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17■□□□□ 0.31
VARS2Q5ST30 MYCLP2-201ENST00000449268 967 ntBASIC17■□□□□ 0.31
VARS2Q5ST30 INE1-201ENST00000456273 945 ntBASIC17■□□□□ 0.31
VARS2Q5ST30 RN7SL752P-201ENST00000463779 287 ntBASIC17■□□□□ 0.31
VARS2Q5ST30 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17■□□□□ 0.31
VARS2Q5ST30 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17■□□□□ 0.31
VARS2Q5ST30 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
VARS2Q5ST30 AC123567.1-201ENST00000548294 1261 ntBASIC17■□□□□ 0.31
VARS2Q5ST30 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17■□□□□ 0.31
VARS2Q5ST30 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17■□□□□ 0.31
VARS2Q5ST30 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17■□□□□ 0.31
VARS2Q5ST30 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VARS2Q5ST30 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
VARS2Q5ST30 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17■□□□□ 0.31
VARS2Q5ST30 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARS2Q5ST30 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17■□□□□ 0.31
VARS2Q5ST30 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARS2Q5ST30 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VARS2Q5ST30 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARS2Q5ST30 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARS2Q5ST30 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARS2Q5ST30 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VARS2Q5ST30 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VARS2Q5ST30 HAUS4P1-201ENST00000406739 1145 ntBASIC16.99■□□□□ 0.31
VARS2Q5ST30 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARS2Q5ST30 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 ADAM3B-201ENST00000569937 840 ntBASIC16.99■□□□□ 0.31
VARS2Q5ST30 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 AC093726.1-201ENST00000608064 963 ntBASIC16.99■□□□□ 0.31
VARS2Q5ST30 IGHV3-72-202ENST00000621503 303 ntBASIC16.99■□□□□ 0.31
VARS2Q5ST30 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARS2Q5ST30 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.99■□□□□ 0.31
VARS2Q5ST30 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARS2Q5ST30 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms