Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 AC073347.1-201ENST00000421633 2643 ntBASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 MIR648-201ENST00000385046 94 ntBASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 LAGE3P1-201ENST00000425356 484 ntBASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 RPS15P9-201ENST00000494093 319 ntBASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 AC129492.6-201ENST00000611383 1305 ntBASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SH2D4BQ5SQS7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 DUSP5P1-201ENST00000441325 1139 ntBASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 UNC93B7-201ENST00000509439 705 ntBASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 AC021087.4-201ENST00000563761 564 ntBASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 GGTLC5P-201ENST00000617623 998 ntBASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 REXO1L6P-202ENST00000619970 1078 ntBASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms