Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 UXT-AS1-201ENST00000590504 1525 ntBASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 MIR648-201ENST00000385046 94 ntBASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 AC142381.1-201ENST00000426099 345 ntBASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 AL358472.5-202ENST00000641448 1267 ntBASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.03■□□□□ 0.48
HERC4Q5GLZ8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 UGT1A2P-201ENST00000454886 866 ntBASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 AC069335.1-201ENST00000489972 472 ntBASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 AL512356.2-201ENST00000546955 174 ntBASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 LINC02560-201ENST00000596379 459 ntBASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HERC4Q5GLZ8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.02■□□□□ 0.47
HERC4Q5GLZ8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HERC4Q5GLZ8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
HERC4Q5GLZ8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
HERC4Q5GLZ8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
HERC4Q5GLZ8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HERC4Q5GLZ8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HERC4Q5GLZ8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HERC4Q5GLZ8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
HERC4Q5GLZ8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.02■□□□□ 0.47
HERC4Q5GLZ8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HERC4Q5GLZ8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 MIR943-201ENST00000401286 94 ntBASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.01■□□□□ 0.47
HERC4Q5GLZ8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms